马赑
发布时间:2020-12-23 查看 0次   字体:[] [] []

副教授 硕士生导师

Email: mbzls@swu.edu.cn

Phone: +86-23-68251615

 

教育研究经历

2019.07 – 至今 副教授 西南大学

2017.07 - 2019.06. 讲师 西南大学

2015.01 - 2017.06. 博士后 西南大学

2011.09 - 2014.12. 博士 西南大学

2009.09 - 2011.06. 硕士 西南大学

 

兴趣所在

Transposons

         How important are transposons for plant evolution…

Genomics and comparative genomics

         Whole Genome Resequencing, Methylation, Evolution, GWAS…

Bioinformatics

         Pipeline software and tools, Database (MnTEdb, MMHub…Upcoming)

 

主持基金

重庆市基础与前沿研究计划 (cstc2018jcyjAX0407)

中国博士后科学基金面上项目 (2016M592622)

中央高校基本科研业务费 (XDJK2015C116)

 

研究成果

1. Ding G, Zhang S, Ma B, Liang J, Li H, Luo Y, He N (2020) Origin and functional differentiation of (E)-beta-ocimene synthases reflect the expansion of monoterpenes in angiosperms. J. Exp. Bot. 71: 6571-6586

2. Li D, Chen G, Ma B, Zhong CZ, He NJ (2020a) Metabolic profiling and transcriptome analysis of mulberry leaves provide insights into flavonoid biosynthesis. J. Agric. Food Chem. 68: 1494-1504

3. Li D#, Ma B#, Xu X#, Chen G, Li T, He N (2020b) MMHub, a database for the mulberry metabolome. Database : the journal of biological databases and curation 2020:

4. Xin Y, Meng S, Ma B, He W, He N (2020) Mulberry genes MnANR and MnLAR confer transgenic plants with resistance to Botrytis cinerea. Plant Sci. 296: 110473

5. Ma B, Kuang L, Xin Y, He N (2019a) New Insights into Long Terminal Repeat Retrotransposons in Mulberry Species. Genes (Basel) 10:

6. Ma B, Xin Y, Kuang L, He N (2019b) Distribution and characteristics of transposable elements in the mulberry genome. Plant Genome 12:

7. Xin Y, Ma B, Xiang Z, He N (2019) Amplification of miniature inverted-repeat transposable elements and the associated impact on gene regulation and alternative splicing in mulberry (Morus notabilis). Mob. DNA 10: 27

8. Hou F, Ma B, Xin Y, Kuang L, He N (2018) Horizontal transfers of LTR retrotransposons in seven species of Rosales. Genome 61: 587-594

9. Lv Z, Huang Y, Ma B, Xiang Z, He N (2018) LysM1 in MmLYK2 is a motif required for the interaction of MmLYP1 and MmLYK2 in the chitin signaling. Plant Cell Rep. 37: 1101-1112

10. Ma B, Kuang LL, Xin YC, Hou F, He NJ (2017a) Reverse transcriptase sequences from mulberry LTR retrotransposons: characterization analysis. Open Life Sci 12: 266-276

11. Ma B, Xin Y, Kuang L, Hou F, He N (2017b) Identification and Characterization of Reverse Transcriptase Fragments of Long Interspersed Nuclear Elements (LINEs) in the <i>Morus notabilis</i> Genome. American Journal of Molecular Biology 07: 138-152

12. Xuan Y, Li C, Wu Y, Ma B, Liu R, Xiang Z, He N (2017) FISH-based mitotic and meiotic diakinesis karyotypes of Morus notabilis reveal a chromosomal fusion-fission cycle between mitotic and meiotic phases. Scientific reports 7: 9573

13. Li H, Liang J, Chen H, Ding G, Ma B, He N (2016) Evolutionary and functional analysis of mulberry type III polyketide synthases. BMC Genomics 17: 540

14. Luo Y#, Ma B#, Zeng Q, Xiang Z, He N (2016) Identification and characterization of Lateral Organ Boundaries Domain genes in mulberry, Morus notabilis. Meta gene 8: 44-50

15. Ma B, Li T, Xiang Z, He N (2015) MnTEdb, a collective resource for mulberry transposable elements. Database : the journal of biological databases and curation 2015: bav004-bav004

16. Zou Z, Xu Y, Ma B, Xiang Z, He N (2015) BmECM25, from the silkworm Bombyx mori, is an extracellular matrix protein. Insect Biochem. Mol. Biol. 65: 68-74

17. An Z, Tang Z, Ma B, Mason AS, Guo Y, Yin J, Gao C, Wei L, Li J, Fu D (2014) Transposon variation by order during allopolyploidisation between Brassica oleracea and Brassica rapa. Plant Biol (Stuttg) 16: 825-835

18. Jia L, Zhang D, Qi X, Ma B, Xiang Z, He N (2014) Identification of the conserved and novel miRNAs in Mulberry by high-throughput sequencing. PloS one 9: e104409

19. Ma B, Luo Y, Jia L, Qi X, Zeng Q, Xiang Z, He N (2014) Genome-wide identification and expression analyses of cytochrome P450 genes in mulberry (Morus notabilis). Journal of integrative plant biology 56: 887-901

20. Shang J, Song P, Ma B, Qi X, Zeng Q, Xiang Z, He N (2014) Identification of the mulberry genes involved in ethylene biosynthesis and signaling pathways and the expression of MaERF-B2-1 and MaERF-B2-2 in the response to flooding stress. Funct Integr Genomics 14: 767-777

21. Wang Q, Ma B, Qi X, Guo Q, Wang X, Zeng Q, He N (2014) Identification and characterization of genes involved in the jasmonate biosynthetic and signaling pathways in mulberry (Morus notabilis). Journal of integrative plant biology 56: 663-672

22. Fu DH#, Ma B#, Mason AS, Xiao ML, Wei LJ, An ZS (2013) MicroRNA-based molecular markers: a novel PCR-based genotyping technique in Brassica species. Plant Breeding 132: 375-381

23. He N, Zhang C, Qi X, Zhao S, Tao Y, Yang G, Lee TH, Wang X, Cai Q, Li D, Lu M, Liao S, Luo G, He R, Tan X, Xu Y, Li T, Zhao A, Jia L, Fu Q, Zeng Q, Gao C, Ma B, Liang J, Wang X, Shang J, Song P, Wu H, Fan L, Wang Q, Shuai Q, Zhu J, Wei C, Zhu-Salzman K, Jin D, Wang J, Liu T, Yu M, Tang C, Wang Z, Dai F, Chen J, Liu Y, Zhao S, Lin T, Zhang S, Wang J, Wang J, Yang H, Yang G, Wang J, Paterson AH, Xia Q, Ji D, Xiang Z (2013) Draft genome sequence of the mulberry tree Morus notabilis. Nat. Commun. 4: 2445

24. Ma B, Wei L, Mason AS, An Z, Xiao M, Banga S, Zhang J, Zhou Q, Fu D (2013) Characterization and comparison of key genes involved with flowering time regulation from Arabidopsis thaliana, Oryza sativa, and Zea mays. African Journal of Biotechnology 12: 353-363

25. Wei L, Xiao M, An Z, Ma B, Mason AS, Qian W, Li J, Fu D (2013a) New insights into nested long terminal repeat retrotransposons in Brassica species. Mol Plant 6: 470-482

26. Wei LJ, Xiao ML, Mason AS, Ma B, Lu K, Li JN, Katrin L, Fu DH (2013b) Characterization and evolutionary analysis of Brassica species-diverged sequences containing simple repeat units. Genes Genom 35: 167-175

 


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